BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031E05LP1|AL429407
(1049 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1173 1272 0.0
3x_Contig689 755 0.0
>3x_Contig1173
Length = 7454
Score = 1272 bits (640), Expect = 0.0
Identities = 793/844 (93%), Gaps = 1/844 (0%)
Strand = Plus / Minus
Query: 1 gtcgtaatttgaacctcagcattcaatgggagagacagtgtcttggaatttttgatttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864 gtcgtaatttgaacctcagcattcaatgggagagacagtgtcttggaatttttgatttaa 805
Query: 61 aacctgcatatccaggccgttcttctcatgtcgccactggcacattcctggtaaatgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 aacctgcatatccaggccgttcttctcatgtcgccactggcacattcctggtaaatgcag 745
Query: 121 gtattagagggaaaggtattggcaaaactttagtggattgttttctgaactgggctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gtattagagggaaaggtattggcaaaactttagtggattgttttctgaactgggctcctc 685
Query: 181 agcttgggtttacatcgtgttactttccgttggtatacggtactaatgtaggaatacgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 agcttgggtttacatcgtgttactttccgttggtatacggtactaatgtaggaatacgaa 625
Query: 241 gaatatttgagtcatctaactttaggagaattggaaaacttccagaatcaggtattttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaatatttgagtcatctaactttaggagaattggaaaacttccagaatcaggtattttga 565
Query: 301 aaggatttgactctccagtagactcattcatatatggtaaagagtttactcatgttagta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aaggatttgactctccagtagactcattcatatatggtaaagagtttactcatgttagta 505
Query: 361 aacacatgaactctttacattcatcagtggacgacactataaaagcaaaatacgaaagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacacatgaactctttacattcatcagtggacgacactataaaagcaaaatacgaaagac 445
Query: 421 tcatatattatctagagcacggagaataccccccatcatgtaatagaaatgagaaggcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcatatattatctagagcacggagaataccccccatcatgtaatagaaatgagaaggcaa 385
Query: 481 gattacgggtaa-ttgctaagaagcattcccttattaacggaaagctccatttcaaagga 539
|||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gattacgggtaatttgttaagaagcattcccttattaacggaaagctccatttcaaagga 325
Query: 540 aaggaagttgtgtatgatccacaacgacagttgagaattgcatatgamactcacatggtt 599
||||||||||||||||||||||||||||||||||||||||||||||| | | | ||||||
Sbjct: 324 aaggaagttgtgtatgatccacaacgacagttgagaattgcatatgaaattgagatggtt 265
Query: 600 gaccatcagggaattaatagagtaacttcaaagctagccgagaaataccattggaaaggt 659
|| ||| |||||||||||||||||| || |||| ||| |||||||| |||||||||||
Sbjct: 264 gaacatgagggaattaatagagtaagttaaaaggtaggagagaaatagaattggaaaggt 205
Query: 660 attaaacaaacagtaatacaagttatcaactcatgttcgaactgccaagaaaacacaaat 719
|||||| ||| ||||||| ||||||| || | ||||| ||| || ||||||| | ||||
Sbjct: 204 attaaataaagagtaatagaagttatgaattgatgttggaaatgataagaaaaaagaaat 145
Query: 720 aggatgtctgatgaaagcgttgttattgacacaagaaccgatcccaatggccaaccgcac 779
||||||| ||||||||| ||||||||||| ||||||| ||| ||||| || | |
Sbjct: 144 aggatgtatgatgaaagtgttgttattgaaacaagaattgataataatgggaaatagaaa 85
Query: 780 acaattgttcatgcagttccacaaggtcatatatctgadagtttggagacattagaagaa 839
| ||||||| ||| |||| | ||||| |||||| ||| |||||||||| ||||||||||
Sbjct: 84 ataattgttaatgaagtttgaaaaggtaatatatatgaaagtttggagatattagaagaa 25
Query: 840 ttga 843
||||
Sbjct: 24 ttga 21
>3x_Contig689
Length = 3037
Score = 755 bits (380), Expect = 0.0
Identities = 417/426 (97%), Gaps = 4/426 (0%)
Strand = Plus / Minus
Query: 616 atagagtaacttcaaagctagccgagaaataccattggaaaggtattaaacaaacagtaa 675
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct: 3029 atagagtaacttcaaagctagccgagaaataccattggaaaggttttagacaaacagtaa 2970
Query: 676 tacaagttatcaactcatgttcgaactgccaagaaaacacaaataggatgtctgatgaaa 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2969 tacaagttatcaactcatgttcgaactgccaagaaaacacaaataggatgtctgatgaaa 2910
Query: 736 gcgttgtt-attgacacaagaaccgatcccaatggccaaccgcacacaattgttcatgca 794
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2909 gcgttgtttattgacacaagaaccgatcccaatggccaaccgcacacaattgttcatgca 2850
Query: 795 gttccacaaggtcatatatctgadagtttggagacattagaagaattgacaccggcggac 854
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 2849 gttccacaaggtcatatatctgaaagtttggagacattagaagaattgacaccggcggac 2790
Query: 855 tccaccaataaatctcggttg-aaacatcatttgttcaaaggattaaatttggcaaagat 913
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2789 tccaccaataaatctcggttgaaaacatcatttgttcaaaggattaaatttggcaaagat 2730
Query: 914 ccgggctctgagagtgtcaaaagaaagctggtcacgagctcagatgactcgatg-awtct 972
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 2729 ccgggctctgagagtgtcaaaagaaagctggtcacgagctcagatgactcgatgaattct 2670
Query: 973 ttttctaactatgctaatgaaggtatcaagagcagcagtaggaag-artcgagaagtggt 1031
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 2669 ttttctaactatgctaatgaaggtatcaagagcagcagtaggaagaagtcgagaagtggt 2610
Query: 1032 gatcca 1037
||||||
Sbjct: 2609 gatcca 2604
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7179
Number of Sequences: 1807
Number of extensions: 7179
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 2
length of query: 1049
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1033
effective length of database: 10,329,639
effective search space: 10670517087
effective search space used: 10670517087
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)